SomeAI.org
  • Hot AI Tools
  • New AI Tools
  • AI Category
SomeAI.org
SomeAI.org

Discover 10,000+ free AI tools instantly. No login required.

About

  • Blog

© 2025 • SomeAI.org All rights reserved.

  • Privacy Policy
  • Terms of Service
Home
3D Modeling
SMILES_RDKit_Py3DMOL_FORK

SMILES_RDKit_Py3DMOL_FORK

Generate 3D molecular models from SMILES strings

You May Also Like

View All
💻

HTML5 AFrame VR

Create and explore 3D recursive polygons and math functions

0
📚

HTML5 Aframe 3D Maps1

Explore Minnesota in a 3D VR environment

0
🦀

02 H5 Aframe AR VR

Generate interactive 3D torus knots in a virtual environment

1
👀

Mediapipe Face Mesh 3d

create 3d-gltf face-mesh from image with mediapipe

13
🐨

SJ 02 H5 AR VR IOT

Generate a dynamic 3D scene with floating lights and torus knots

1
🔥

AW 02 H5 AR VR IOT

Create a dynamic 3D scene with random colorful knots

0
🐢

SS 02 H5 AR VR IOT

Generate a dynamic 3D scene with rotating lights and knots

1
💩

SD H5 AR VR IOT

Create interactive 3D scenes with torus knots

1
🏃

CharacterGen

Gradio demo of CharacterGen (SIGGRAPH 2024)

203
📉

HTML5 Aframe Augmented Reality Model Viewer

View 3D models in AR/VR using your phone

3
💩

HTML5 Aframe 3D Maps

Explore Minnesota with a 3D video map

1
🥚

Talking Egg

Transform ideas into AR experiences with a 3D model

2

What is SMILES_RDKit_Py3DMOL_FORK ?

SMILES_RDKit_Py3DMOL_FORK is a tool designed to generate 3D molecular models from SMILES strings. It leverages the power of RDKit for chemical structure processing and Py3DMOL for 3D visualization, making it a robust solution for chemists and researchers to convert 2D chemical representations into interactive 3D models.

Features

• SMILES String Conversion: Easily convert SMILES strings into 3D molecular structures. • 3D Visualization: Generate high-quality 3D molecular models using Py3DMOL. • Chemical Manipulation: Utilize RDKit's capabilities for molecular structure manipulation and analysis. • Customizable Visualizations: Adjust visual properties such as colors, bond styles, and atom labels. • Cross-Platform Compatibility: Run the tool on Windows, macOS, and Linux systems. • Integration Ready: Easily integrate with other cheminformatics pipelines and workflows.

How to use SMILES_RDKit_Py3DMOL_FORK ?

  1. Install the Tool: Use pip to install the package: pip install SMILES_RDKit_Py3DMOL_FORK.
  2. Import Libraries: Import the required modules in your Python script:
    from SMILES_RDKit_Py3DMOL_FORK import smiles_to_3d
    
  3. Convert SMILES to 3D: Use the smiles_to_3d function to generate a 3D model:
    molecule = smiles_to_3d("CC(=O)Nc1ccc(cc1)C(=O)N")  # Example SMILES string
    
  4. Visualize the Model: Render the 3D model using Py3DMOL:
    molecule.visualize()
    

Frequently Asked Questions

What is the input format for SMILES strings?
The input should be a valid SMILES string, such as "CC(=O)Nc1ccc(cc1)C(=O)N".

Can I customize the appearance of the 3D model?
Yes, you can customize colors, bond styles, and atom labels using Py3DMOL's styling options.

Is the tool compatible with all operating systems?
Yes, SMILES_RDKit_Py3DMOL_FORK is designed to work on Windows, macOS, and Linux.

Recommended Category

View All
🎙️

Transcribe podcast audio to text

🚫

Detect harmful or offensive content in images

🔖

Put a logo on an image

❓

Visual QA

🧹

Remove objects from a photo

🎧

Enhance audio quality

🌍

Language Translation

🔍

Detect objects in an image

🎵

Music Generation

🖼️

Image Captioning

🌐

Translate a language in real-time

🌈

Colorize black and white photos

🎥

Convert a portrait into a talking video

🧑‍💻

Create a 3D avatar

📈

Predict stock market trends